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5-Carboxymethylaminomethyluridine

Cat. No. M41551
5-Carboxymethylaminomethyluridine Structure
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Quality Control & Documentation
Biological Activity

5-Carboxymethylaminomethyluridine is a thymidine analogue.

Chemical Information
Molecular Weight 331.28
Formula C12H17N3O8
CAS Number 69181-26-6
Storage Powder          -20°C   3 years ;  4°C   2 years
In solvent       -80°C   6 months ;  -20°C   1 month
Conversion of different model animals based on BSA (PMID: 27057123)
Species Mouse Rat Rabbit Guinea pig Hamster Dog
Weight (kg) 0.02 0.15 1.8 0.4 0.08 10
Body Surface Area (m2) 0.007 0.025 0.15 0.05 0.02 0.5
Km factor 3 6 12 8 5 20
Animal A (mg/kg) = Animal B (mg/kg) multiplied by  Animal B Km
Animal A Km

For example, to modify the dose of Compound A used for a mouse (20 mg/kg) to a dose based on the BSA for a rat, multiply 20 mg/kg by the Km factor for a mouse and then divide by the Km factor for a rat. This calculation results in a rat equivalent dose for Compound A of 10 mg/kg.

References

[1] Navanath M Kumbhar et al. J Mol Graph Model. Structural significance of hypermodified nucleoside 5-carboxymethylaminomethyluridine (cmnm5U) from 'wobble' (34th) position of mitochondrial tRNAs: Molecular modeling and Markov state model studies

[2] Kana Asano et al. Nucleic Acids Res. Metabolic and chemical regulation of tRNA modification associated with taurine deficiency and human disease

[3] Grazyna Leszczynska et al. Org Biomol Chem. Site-selected incorporation of 5-carboxymethylaminomethyl(-2-thio)uridine into RNA sequences by phosphoramidite chemistry

[4] Aya Kitamura et al. J Biol Chem. Characterization and structure of the Aquifex aeolicus protein DUF752: a bacterial tRNA-methyltransferase (MnmC2) functioning without the usually fused oxidase domain (MnmC1)

[5] Takuo Osawa et al. Structure. Conserved cysteine residues of GidA are essential for biogenesis of 5-carboxymethylaminomethyluridine at tRNA anticodon

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Keywords: 5-Carboxymethylaminomethyluridine supplier, Nucleoside Antimetabolite/Analog, inhibitors, activators


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