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3-Methylcytidine

Cat. No. M13697
3-Methylcytidine Structure
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Biological Activity

3-Methylcytidine, a urinary nucleoside, can be used as a biomarker of four different types of cancer: lung cancer, gastric cancer, colon cancer, and breast cancer.

Chemical Information
Molecular Weight 257.24
CAS Number 2140-64-9
Solubility (25°C) Water 90 mg/mL
DMSO 83.33 mg/mL
Storage Powder          -20°C   3 years ;  4°C   2 years
In solvent       -80°C   6 months ;  -20°C   1 month
Conversion of different model animals based on BSA (PMID: 27057123)
Species Mouse Rat Rabbit Guinea pig Hamster Dog
Weight (kg) 0.02 0.15 1.8 0.4 0.08 10
Body Surface Area (m2) 0.007 0.025 0.15 0.05 0.02 0.5
Km factor 3 6 12 8 5 20
Animal A (mg/kg) = Animal B (mg/kg) multiplied by  Animal B Km
Animal A Km

For example, to modify the dose of Compound A used for a mouse (20 mg/kg) to a dose based on the BSA for a rat, multiply 20 mg/kg by the Km factor for a mouse and then divide by the Km factor for a rat. This calculation results in a rat equivalent dose for Compound A of 10 mg/kg.

References

[1] Katherine E Bohnsack, et al. Trends Biochem Sci. Roles and dynamics of 3-methylcytidine in cellular RNAs

[2] Johnsi Mathivanan, et al. Curr Protoc. Synthesis and Purification of N 3 -Methylcytidine (m 3 C) Modified RNA Oligonucleotides

[3] Li-Sheng Zhang, et al. Nat Cell Biol. ALKBH7-mediated demethylation regulates mitochondrial polycistronic RNA processing

[4] Song Mao, et al. ACS Chem Biol. Base Pairing and Functional Insights into N3-Methylcytidine (m 3 C) in RNA

[5] Cheng-Jie Ma, et al. ACS Chem Biol. AlkB Homologue 1 Demethylates N3-Methylcytidine in mRNA of Mammals

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