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Cy3.5

Cat. No. M31322
Cy3.5 Structure
Synonym:

Cyanine 3.5

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Biological Activity

Cy3.5 (Cyanine 3.5) is a red fluorescent anthocyanin fluorescent dye. It can be used to label proteins, antibodies, peptides, nucleic acid molecules and nanoparticles.

Chemical Information
Molecular Weight 891.02
Formula C39H42N2O14S4
CAS Number 1284240-77-2
Storage -20℃
Conversion of different model animals based on BSA (PMID: 27057123)
Species Mouse Rat Rabbit Guinea pig Hamster Dog
Weight (kg) 0.02 0.15 1.8 0.4 0.08 10
Body Surface Area (m2) 0.007 0.025 0.15 0.05 0.02 0.5
Km factor 3 6 12 8 5 20
Animal A (mg/kg) = Animal B (mg/kg) multiplied by  Animal B Km
Animal A Km

For example, to modify the dose of Compound A used for a mouse (20 mg/kg) to a dose based on the BSA for a rat, multiply 20 mg/kg by the Km factor for a mouse and then divide by the Km factor for a rat. This calculation results in a rat equivalent dose for Compound A of 10 mg/kg.

References

[1] Mohamed Ghoneim, et al. J Fluoresc. Single-Molecule Characterization of Cy3.5 -Cy5.5 Dye Pair for FRET Studies of Nucleic Acids and Nucleosomes

[2] Mingrui Yang, et al. J Am Chem Soc. Delayed Photoluminescence in Metal-Conjugated Fluorophores

[3] Huiming Zhang. Gly-Ser-Ser-Lys-(FITC)-Gly-Gly-Gly-Cys-Arg-Gly-Asp-Cys-CLIO-Cy5.5

[4] Matthew E Sanborn, et al. J Phys Chem B. Fluorescence properties and photophysics of the sulfoindocyanine Cy3 linked covalently to DNA

[5] H J Gruber, et al. Bioconjug Chem. Anomalous fluorescence enhancement of Cy3 and cy3.5 versus anomalous fluorescence loss of Cy5 and Cy7 upon covalent linking to IgG and noncovalent binding to avidin

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